Microcystis aeruginosa- Microcystis ambae
- Microcystis brebissonii
- Microcystis caerulea
- Microcystis donnellii
- Microcystis flosaquae
- Microcystis fuscolutea
- Microcystis glauca
- Microcystis grevillei
- Microcystis ichthyoblabe
- Microcystis indica
- Microcystis lobata
- Microcystis marina
- Microcystis merismopedioides
- Microcystis nigra
- Microcystis ovalis
- Microcystis pallida
- Microcystis parasitica
- Microcystis prasina
- Microcystis protocystis
- Microcystis pulchra
- Microcystis pulverea
- Microcystis scripta
- Microcystis splendens
- Microcystis viridis
- Microcystis wesenbergii
- Microcystis zanardinii