Botryosphaeria abietina- Botryosphaeria acaciae
- Botryosphaeria advena
- Botryosphaeria agaves
- Botryosphaeria astrocaryi
- Botryosphaeria bakeri
- Botryosphaeria berengeriana
- Botryosphaeria costae
- Botryosphaeria cruenta
- Botryosphaeria dispersa
- Botryosphaeria disrupta
- Botryosphaeria dothidea
- Botryosphaeria effusa
- Botryosphaeria egenula
- Botryosphaeria festucae
- Botryosphaeria fourcroyae
- Botryosphaeria gaubae
- Botryosphaeria hamamelidis
- Botryosphaeria hyperborea
- Botryosphaeria hypoxyloidea
- Botryosphaeria juglandina
- Botryosphaeria lagerheimii
- Botryosphaeria malvacearum
- Botryosphaeria mamanae
- Botryosphaeria oblongula
- Botryosphaeria piceae
- Botryosphaeria pipturi
- Botryosphaeria plicatula
- Botryosphaeria pustulata
- Botryosphaeria quercuum
- Botryosphaeria rhododendricola
- Botryosphaeria sarmentorum
- Botryosphaeria simplex
- Botryosphaeria spiraeae
- Botryosphaeria stevensii
- Botryosphaeria tiliacea
- Botryosphaeria trabutiana
- Botryosphaeria trames
- Botryosphaeria tropicalis
- Botryosphaeria uleana
- Botryosphaeria viscosa
- Botryosphaeria xanthocephala