- Diplodia abrotani
- Diplodia acerina
- Diplodia aceris
- Diplodia aegyptiaca
- Diplodia aesculi
- Diplodia agni-casti
- Diplodia agrostidis
- Diplodia ailanthina
- Diplodia albotecta
- Diplodia alni
- Diplodia ampelopidis
- Diplodia amygdali
- Diplodia antiqua
- Diplodia arachidis
- Diplodia arachnoidea
- Diplodia arecina
- Diplodia argentina
- Diplodia aristolochiae-siphonis
- Diplodia aristolochiae
- Diplodia artocarpi
- Diplodia artocarpina
- Diplodia arundinacea
- Diplodia asclepiadea
- Diplodia astrocaryi
- Diplodia atrata
- Diplodia bacchi
- Diplodia bambusina
- Diplodia bauhiniae
- Diplodia bignoniae
- Diplodia brachypodii
- Diplodia bresadolae
- Diplodia broussonetiae
- Diplodia butleri
- Diplodia buxi
- Diplodia buxicola
- Diplodia calamicola
- Diplodia caraganae
- Diplodia carpini
- Diplodia caryigena
- Diplodia cassiae-multijugae
- Diplodia castaneae
- Diplodia catechu
- Diplodia caulicola
- Diplodia cavanillesiana
- Diplodia cerasorum
- Diplodia cercidis
- Diplodia chaetomioides
- Diplodia cinchonae
- Diplodia cincta
- Diplodia citharexyli
- Diplodia citri
- Diplodia citrina
- Diplodia cladrastidis
- Diplodia clandestina
- Diplodia cocculi
- Diplodia cocoina
- Diplodia comari
- Diplodia congesta
- Diplodia consors
- Diplodia constricta
- Diplodia corchori
- Diplodia corni
- Diplodia coronillae
- Diplodia coryli
- Diplodia crataegi
- Diplodia curreyi
- Diplodia dalbergiae
- Diplodia daturae
- Diplodia diospyri
- Diplodia diversispora
- Diplodia dracaenae
- Diplodia dracaenicola
- Diplodia durionis
- Diplodia edgworthiae
- Diplodia elaeagni
- Diplodia embryopteridis
- Diplodia ephedicola
- Diplodia epicocos
- Diplodia euonymi
- Diplodia euterpes
- Diplodia exochordae
- Diplodia extensa
- Diplodia farnesiana
- Diplodia foeniculina
- Diplodia forsythiae
- Diplodia frangulae
- Diplodia fructus-pandani
- Diplodia gleoleriae
- Diplodia gmelinae
- Diplodia hederae
- Diplodia henriquesii
- Diplodia herbarum
- Diplodia heteromelina
- Diplodia hibisci
- Diplodia hippophaearum
- Diplodia hypoxyloides
- Diplodia hyssopi
- Diplodia ilicicola
- Diplodia incarvilleae
- Diplodia indica
- Diplodia inocarpi
- Diplodia inquinans
- Diplodia ischaemi
- Diplodia jatrophae
- Diplodia juglandis
- Diplodia juniperi
- Diplodia lablab
- Diplodia lagenariae
- Diplodia landolphiae
- Diplodia laureolae
- Diplodia lichenopsis
- Diplodia liriodendri
- Diplodia litseae
- Diplodia lonicerae
- Diplodia loranthi
- Diplodia lupini
- Diplodia maclurae
- Diplodia maculicola
- Diplodia malorum
- Diplodia marsdeniae
- Diplodia maura
- Diplodia melaena
- Diplodia meliae
- Diplodia mori
- Diplodia morina
- Diplodia muehlenbeckiae
- Diplodia musae
- Diplodia oenocarpi
- Diplodia opuli
- Diplodia opuntiae
- Diplodia orae-maris
- Diplodia ostryae
- Diplodia otthiana
- Diplodia padi
- Diplodia paliuri
- Diplodia palmicola
- Diplodia paradisiaca
- Diplodia pedilanthi
- Diplodia phellodendri
- Diplodia philadelphi
- Diplodia pistaciae
- Diplodia pithecellobii
- Diplodia pittospori
- Diplodia platanicola
- Diplodia polygonicola
- Diplodia populina
- Diplodia pruni
- Diplodia pseudodiplodia
- Diplodia puerariae
- Diplodia pyrenophora
- Diplodia ramulicola
- Diplodia rehmii
- Diplodia rhamni-alaterni
- Diplodia rheae
- Diplodia rheea
- Diplodia rhizophila
- Diplodia rhoina
- Diplodia rhois
- Diplodia rosae
- Diplodia rosarum
- Diplodia roumeguerei
- Diplodia rubi
- Diplodia rudis
- Diplodia salicina
- Diplodia sambuci
- Diplodia sambucina
- Diplodia sansevierae
- Diplodia sarothamni
- Diplodia scabra
- Diplodia scoparii
- Diplodia seaforthiae
- Diplodia siliquastri
- Diplodia siphonis
- Diplodia sipolisiae
- Diplodia solani
- Diplodia spegazzinia
- Diplodia spegazziniana
- Diplodia spiraeae
- Diplodia subpilosa
- Diplodia subtecta
- Diplodia subterranea
- Diplodia sycina
- Diplodia sydowiana
- Diplodia symphoricarpi
- Diplodia synedrellae
- Diplodia tamaricina
- Diplodia tamaricis
- Diplodia taxi
- Diplodia tecomae
- Diplodia thalictricola
- Diplodia thujae
- Diplodia thujana
- Diplodia tiliae
- Diplodia tsugae
- Diplodia ureniana
- Diplodia valsoides
- Diplodia veratri
- Diplodia vincae
- Diplodia wurthii
- Diplodia yuccae
- Diplodia zanthoxyli