- Hypogymnia alpina
- Hypogymnia amplexa
- Hypogymnia apinnata
- Hypogymnia arcuata
- Hypogymnia austerodes
- Hypogymnia australica
- Hypogymnia beringiana
- Hypogymnia billardieri
- Hypogymnia bitteri
- Hypogymnia bryophila
- Hypogymnia bulbosa
- Hypogymnia canadensis
- Hypogymnia castanea
- Hypogymnia delavayi
- Hypogymnia dichroma
- Hypogymnia diffractaica
- Hypogymnia duplicata
- Hypogymnia elgonensis
- Hypogymnia enteromorpha
- Hypogymnia enteromorphoides
- Hypogymnia farinacea
- Hypogymnia fistulosa
- Hypogymnia flavida
- Hypogymnia gracilis
- Hypogymnia guadalupensis
- Hypogymnia hengduanensis
- Hypogymnia heterophylla
- Hypogymnia hokkaidensis
- Hypogymnia imshaugii
- Hypogymnia inactiva
- Hypogymnia incurvoides
- Hypogymnia inflata
- Hypogymnia irregularis
- Hypogymnia kosciuskoensis
- Hypogymnia krogiae
- Hypogymnia laccata
- Hypogymnia laminisorediata
- Hypogymnia laminosorediata
- Hypogymnia lugubris
- Hypogymnia maderensis
- Hypogymnia magnifica
- Hypogymnia metaphysodes
- Hypogymnia minilobata
- Hypogymnia mollis
- Hypogymnia montana
- Hypogymnia mundata
- Hypogymnia occidentalis
- Hypogymnia oceanica
- Hypogymnia physodes
- Hypogymnia pruinosa
- Hypogymnia pseudobitteriana
- Hypogymnia pseudoenteromorpha
- Hypogymnia pseudopruinosa
- Hypogymnia pulchrilobata
- Hypogymnia pulverata
- Hypogymnia recurva
- Hypogymnia rugosa
- Hypogymnia sachalinensis
- Hypogymnia salsa
- Hypogymnia schizidiata
- Hypogymnia sinica
- Hypogymnia stricta
- Hypogymnia subcrustacea
- Hypogymnia subobscura
- Hypogymnia subphysodes
- Hypogymnia subpruinosa
- Hypogymnia taiwanalpina
- Hypogymnia tasmanica
- Hypogymnia tavaresii
- Hypogymnia thomsoniana
- Hypogymnia tubularis
- Hypogymnia tubulosa
- Hypogymnia tumidula
- Hypogymnia turgidula
- Hypogymnia verruculosa
- Hypogymnia vittata
- Hypogymnia wilfiana