- Diaporthe acerina
- Diaporthe aceris
- Diaporthe adunca
- Diaporthe aesculicola
- Diaporthe ambiens
- Diaporthe amorphae
- Diaporthe aorista
- Diaporthe araliae
- Diaporthe asclepiadis
- Diaporthe baccharidis
- Diaporthe bakeri
- Diaporthe baptisiae
- Diaporthe beckhausii
- Diaporthe berlesiana
- Diaporthe briardiana
- Diaporthe buxi
- Diaporthe callicarpae
- Diaporthe caraganae
- Diaporthe carpini
- Diaporthe caryigena
- Diaporthe castaneti
- Diaporthe catalpae
- Diaporthe celastrina
- Diaporthe chailletii
- Diaporthe circumscripta
- Diaporthe citrincola
- Diaporthe claviceps
- Diaporthe coemansii
- Diaporthe columbiensis
- Diaporthe compressa
- Diaporthe congener
- Diaporthe congenera
- Diaporthe congesta
- Diaporthe conigena
- Diaporthe conjuncta
- Diaporthe corni
- Diaporthe cornicola
- Diaporthe crassiuscula
- Diaporthe crataegi
- Diaporthe crinigera
- Diaporthe crotalariae
- Diaporthe cylindrospora
- Diaporthe decedens
- Diaporthe decorticans
- Diaporthe delogneana
- Diaporthe densa
- Diaporthe desmodiana
- Diaporthe detrusa
- Diaporthe didymelloides
- Diaporthe difficilior
- Diaporthe dircae
- Diaporthe disputata
- Diaporthe dolosa
- Diaporthe dorycnea
- Diaporthe dryophila
- Diaporthe dubia
- Diaporthe eburensis
- Diaporthe elaeagni
- Diaporthe epimicta
- Diaporthe eumorpha
- Diaporthe euonymi
- Diaporthe euspina
- Diaporthe eusticha
- Diaporthe faberi
- Diaporthe fagi
- Diaporthe fallaciosa
- Diaporthe farinosa
- Diaporthe fasciculata
- Diaporthe feltgenii
- Diaporthe fibrosa
- Diaporthe floridana
- Diaporthe forabilis
- Diaporthe fuchsiae
- Diaporthe fuckelii
- Diaporthe furfuracea
- Diaporthe galligena
- Diaporthe gallophila
- Diaporthe genistae
- Diaporthe gladioli
- Diaporthe glandulosa
- Diaporthe gloriosa
- Diaporthe gorgonoidea
- Diaporthe halesiae
- Diaporthe helicis
- Diaporthe hydrangeae
- Diaporthe hypospilina
- Diaporthe hypoxyloides
- Diaporthe hystricula
- Diaporthe ilicis
- Diaporthe immaculata
- Diaporthe immersa
- Diaporthe impulsa
- Diaporthe incompta
- Diaporthe incongrua
- Diaporthe incrustans
- Diaporthe insignis
- Diaporthe insularis
- Diaporthe juglandina
- Diaporthe juniperi
- Diaporthe kellermaniana
- Diaporthe laschii
- Diaporthe lentaginis
- Diaporthe leucostroma
- Diaporthe ligulata
- Diaporthe ligustri-vulgaris
- Diaporthe ligustrina
- Diaporthe lokoyae
- Diaporthe ludwigiana
- Diaporthe lupini
- Diaporthe macrostoma
- Diaporthe magnoliae
- Diaporthe mali
- Diaporthe mamiania
- Diaporthe marchica
- Diaporthe mazzantioides
- Diaporthe megalospora
- Diaporthe melanocarpa
- Diaporthe microcarpa
- Diaporthe microstroma
- Diaporthe minuta
- Diaporthe mitis
- Diaporthe mucosa
- Diaporthe mucronulata
- Diaporthe multipunctata
- Diaporthe muralis
- Diaporthe necans
- Diaporthe neilliae
- Diaporthe niesslii
- Diaporthe nitschkei
- Diaporthe nivosa
- Diaporthe nobilis
- Diaporthe nomurai
- Diaporthe oligocarpa
- Diaporthe oligocarpoides
- Diaporthe oncostoma
- Diaporthe ontariensis
- Diaporthe opuli
- Diaporthe otthii
- Diaporthe oxyspora
- Diaporthe palustris
- Diaporthe parabolica
- Diaporthe pardalota
- Diaporthe pennsylvanica
- Diaporthe perjuncta
- Diaporthe petiolarum
- Diaporthe phaseolorum
- Diaporthe pimeleae
- Diaporthe pinastri
- Diaporthe pinophylla
- Diaporthe pithya
- Diaporthe placoides
- Diaporthe polygoni
- Diaporthe priva
- Diaporthe pruni
- Diaporthe prunicola
- Diaporthe pulchra
- Diaporthe punctostoma
- Diaporthe punctulata
- Diaporthe pusilla
- Diaporthe quercina
- Diaporthe radicina
- Diaporthe radula
- Diaporthe recondita
- Diaporthe retecta
- Diaporthe rhamnigena
- Diaporthe rhoina
- Diaporthe rhois
- Diaporthe rostellata
- Diaporthe rudis
- Diaporthe saccardiana
- Diaporthe scabra
- Diaporthe semi-immersa
- Diaporthe seposita
- Diaporthe simplicior
- Diaporthe sociabilis
- Diaporthe sorbariae
- Diaporthe sorbicola
- Diaporthe sparsa
- Diaporthe sphingiophora
- Diaporthe spiculosa
- Diaporthe spiraeicola
- Diaporthe staphylina
- Diaporthe stereostoma
- Diaporthe stictostoma
- Diaporthe striaeformis
- Diaporthe striiformis
- Diaporthe strumelloides
- Diaporthe subcongrua
- Diaporthe syngenesia
- Diaporthe take
- Diaporthe taxicola
- Diaporthe tenuirostris
- Diaporthe tessera
- Diaporthe teucrii
- Diaporthe therryana
- Diaporthe tortuosa
- Diaporthe transiens
- Diaporthe transversalis
- Diaporthe trinucleata
- Diaporthe tulasnei
- Diaporthe tumulata
- Diaporthe ulmicola
- Diaporthe valerianae
- Diaporthe valida
- Diaporthe valsiformis
- Diaporthe varians
- Diaporthe veronicae
- Diaporthe viburni
- Diaporthe vincae
- Diaporthe viticola
- Diaporthe winteri
- Diaporthe woolworthii
- Diaporthe zopfii