Amphisphaeria abiegna- Amphisphaeria aeruginosa
- Amphisphaeria ambiens
- Amphisphaeria amomi
- Amphisphaeria apiosporoides
- Amphisphaeria arengae
- Amphisphaeria arizonica
- Amphisphaeria aterrima
- Amphisphaeria australis
- Amphisphaeria bambusae
- Amphisphaeria biturbinata
- Amphisphaeria bufonia
- Amphisphaeria citri
- Amphisphaeria clerodendri
- Amphisphaeria corticola
- Amphisphaeria culmicola
- Amphisphaeria deformis
- Amphisphaeria dothideaespora
- Amphisphaeria edamensis
- Amphisphaeria emiliana
- Amphisphaeria fallax
- Amphisphaeria foeda
- Amphisphaeria fourcroyae
- Amphisphaeria gaubae
- Amphisphaeria granulosa
- Amphisphaeria hesperidum
- Amphisphaeria khandalensis
- Amphisphaeria leucaenae
- Amphisphaeria magnusii
- Amphisphaeria millepunctata
- Amphisphaeria multipunctata
- Amphisphaeria notabilis
- Amphisphaeria olearum
- Amphisphaeria paedida
- Amphisphaeria palawanensis
- Amphisphaeria pelorospora
- Amphisphaeria portoricensis
- Amphisphaeria pseudoumbrina
- Amphisphaeria pusiola
- Amphisphaeria querceti
- Amphisphaeria sapinea
- Amphisphaeria smaragdina
- Amphisphaeria spegazziniana
- Amphisphaeria strychnicola
- Amphisphaeria subiculosa
- Amphisphaeria umbrina
- Amphisphaeria vibratilis
- Amphisphaeria zerbina