- Phomatospora anacardiicola
- Phomatospora arenaria
- Phomatospora bellaminuta
- Phomatospora berkeleyi
- Phomatospora caricicola
- Phomatospora coprophila
- Phomatospora datiscae
- Phomatospora dinemasporium
- Phomatospora endopteris
- Phomatospora errabunda
- Phomatospora feurichiana
- Phomatospora gelatinospora
- Phomatospora hyalina
- Phomatospora hydrophila
- Phomatospora ingae
- Phomatospora insignis
- Phomatospora juncicola
- Phomatospora leptasca
- Phomatospora libanotidis
- Phomatospora lithocarpi
- Phomatospora luteotingens
- Phomatospora minutissima
- Phomatospora moravica
- Phomatospora napoleoneae
- Phomatospora pandani
- Phomatospora paulensis
- Phomatospora podocarpi
- Phomatospora ribesia
- Phomatospora rosae
- Phomatospora saccardoi
- Phomatospora striatispora
- Phomatospora wistariae